Transcriptome

A Single-Cell Transcriptome Atlas of the Human Pancreas

Mauro J. Muraro, Gitanjali Dharmadhikari, Dominic Grün, Nathalie Gröen, Tim Dielen, Erik W.L. Jansen, Léon van Gurp, Marten A. Engelse, Françoise Carlotti, Eelco J.P. de Koning, Alexander van Oudenaarden

引用数: 1505 • 2016

Deep Learning Applications for Predicting Pharmacological Properties of Drugs and Drug Repurposing Using Transcriptomic Data

Alexander Aliper, Sergey Plis, Artem V. Artemov, Alvaro Ulloa, Polina Mamoshina, Alex Zhavoronkov

引用数: 600 • 2016

FateID infers cell fate bias in multipotent progenitors from single-cell RNA-seq data

Josip S. Herman, Dominic Grün

引用数: 384 • 2018

Pattern and synchrony of gene expression among sympatric marine microbial populations

Elizabeth A. Ottesen, Curtis R. Young, John M. Eppley, John P. Ryan, Francisco P. Chávez, Christopher A. Scholin, Edward F. DeLong

引用数: 211 • 2013

Separation and parallel sequencing of the genomes and transcriptomes of single cells using G&T-seq

Iain C. Macaulay, Mabel Teng, Wilfried Haerty, Parveen Kumar, Chris P. Ponting, Thierry Voet

引用数: 192 • 2016

Comprehensive expression atlas of fibroblast growth factors and their receptors generated by a novel robotic in situ hybridization platform

Murat Yaylaoglu, Andrew J. Titmus, Axel Visel, Gonzalo Álvarez-Bolado, Christina Thaller, Gregor Eichele

引用数: 168 • 2005

Polony gels enable amplifiable DNA stamping and spatial transcriptomics of chronic pain

Xiaonan Fu, Li Sun, Runze Dong, Jane Chen, Runglawan Silakit, Logan Condon, Yiing Lin, Shin Lin, Richard D. Palmiter, Liangcai Gu

引用数: 153 • 2022

Robotic high-throughput biomanufacturing and functional differentiation of human pluripotent stem cells

Carlos A. Tristan, Pinar Ormanoglu, Jaroslav Slamecka, Claire Malley, Pei‐Hsuan Chu, Vukasin M. Jovanovic, Yeliz Gedik, Yogita Jethmalani, Charles Bonney, Elena Barnaeva, John Braisted, Sunil K. Mallanna, Dorjbal Dorjsuren, Michael J. Iannotti, Ty C. Voss, Sam Michael, Anton Simeonov, Ilyas Singeç

引用数: 68 • 2021

A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood-stage samples

Michal Kucharski, Jaishree Tripathi, Sourav Nayak, Lei Zhu, Grennady Wirjanata, Rob W. van der Pluijm, Mehul Dhorda, Arjen M. Dondorp, Zbynek Bozdech

引用数: 67 • 2020

Transcriptomes of lineage-specific <i>Drosophila</i> neuroblasts profiled via genetic targeting and robotic sorting

Ching-Po Yang, Chi-Cheng Fu, Ken Sugino, Zhiyong Liu, Qingzhong Ren, Lingyu Liu, Xiaohao Yao, Luke P. Lee, Tzumin Lee

引用数: 65 • 2015

Frontiers in molecular mycorrhizal research – genes, loci, dots and spins

Francis Martin

引用数: 52 • 2001

Classical galactosaemia: novel insights in IgG N-glycosylation and N-glycan biosynthesis

Ashwini Maratha, Henning Stöckmann, Karen P. Coss, M. Estela Rubio‐Gozalbo, Ina Knerr, Maria Fitzgibbon, Terri McVeigh, Patricia Foley, Catherine Moss, Hugh-Owen Colhoun, Britt van Erven, K Stephens, Peter Doran, Pauline M. Rudd, Eileen P. Treacy

引用数: 46 • 2016

Analyzing serial cDNA libraries revealed reactive oxygen species and gibberellins signaling pathways in the salt response of Upland cotton (Gossypium hirsutum L.)

Gongyao Shi, Xiaoyan Guo, Jinyan Guo, Laihua Liu, Jinping Hua

引用数: 40 • 2015

Simultaneous quantification of protein–DNA interactions and transcriptomes in single cells with scDam&amp;T-seq

Corina M. Markodimitraki, Franka J. Rang, Koos Rooijers, Sandra S. de Vries, Alex Chialastri, Kim L. de Luca, Silke J. A. Lochs, Dylan Mooijman, Siddharth S. Dey, Jop Kind

引用数: 34 • 2020

Exploring molecular networks directly in the cell

Walter Schubert

引用数: 34 • 2006

Abiotic stress in plants: From Genomics to Metabolomics

Aryadeep Roychoudhury, Karabi Datta, Swapn K. Datta

引用数: 32 • 2011

Robotic data acquisition with deep learning enables cell image–based prediction of transcriptomic phenotypes

Jianshi Jin, Taisaku Ogawa, Nozomi Hojo, Kirill Kryukov, Kenji Shimizu, Tomokatsu Ikawa, Tadashi Imanishi, Taku Okazaki, Katsuyuki Shiroguchi

引用数: 31 • 2022

Simultaneous spatiotemporal transcriptomics and microscopy of Bacillus subtilis swarm development reveal cooperation across generations

Hannah Jeckel, Kazuki Nosho, Konstantin Neuhaus, Alasdair Hastewell, Dominic J. Skinner, Dibya Saha, Niklas Netter, Nicole Paczia, Jörn Dunkel, Knut Drescher

引用数: 23 • 2023

High-Throughput Single-Cell RNA Sequencing and Data Analysis

Josip S. Herman, J. Andrew Pospisilik, Dominic Grün

引用数: 23 • 2018

Single-Cell Transcriptomics Enters the Age of Mass Production

Jan Philipp Junker, Alexander van Oudenaarden

引用数: 20 • 2015