Energy landscape

Improvements to Robotics-Inspired Conformational Sampling in Rosetta

Amelie Stein, Tanja Kortemme

Citations: 216 • 2013

Self-driving laboratories to autonomously navigate the protein fitness landscape

Jacob Rapp, Bennett J. Bremer, Philip A. Romero

Citations: 169 • 2024

Using Motion Planning to Study Protein Folding Pathways

Nancy M. Amato, Guang Song

Citations: 163 • 2002

Using Motion Planning to Map Protein Folding Landscapes and Analyze Folding Kinetics of Known Native Structures

Nancy M. Amato, Ken A. Dill, Guang Song

Citations: 110 • 2003

Dynamic DNA Origami Device for Measuring Compressive Depletion Forces

Michael W. Hudoba, Yi Luo, Angelita Zacharias, Michael G. Poirier, Carlos E. Castro

Citations: 71 • 2017

Guiding the Search for Native-like Protein Conformations with an Ab-initio Tree-based Exploration

Amarda Shehu, Brian Olson

Citations: 56 • 2010

Randomized tree construction algorithm to explore energy landscapes

Léonard Jaillet, Francesc J. Corcho, Juan J. Pérez, Juan Cortés

Citations: 54 • 2011

Leaf-Like Origami with Bistability for Self-Adaptive Grasping Motions

Hiromi Yasuda, Kyle Johnson, Vicente Arroyos, Koshiro Yamaguchi, Jordan R. Raney, Jinkyu Yang

Citations: 52 • 2022

Protein folding by motion planning

Shawna Thomas, Guang Song, Nancy M. Amato

Citations: 51 • 2005

Capturing molecular energy landscapes with probabilistic conformational roadmaps

Mehmet Serkan Apaydın, Amit Pal Singh, Douglas L. Brutlag, J.-C. Latombe

Citations: 42 • 2002

An energy landscape approach to locomotor transitions in complex 3D terrain

Ratan Othayoth, George Thoms, Chen Li

Citations: 37 • 2020

Using motion planning to map protein folding landscapes and analyze folding kinetics of known native structures

Nancy M. Amato, Ken A. Dill, Guang Song

Citations: 28 • 2002

An Ab-initio tree-based exploration to enhance sampling of low-energy protein conformations

Amarda Shehu

Citations: 27 • 2009

Characterizing Energy Landscapes of Peptides Using a Combination of Stochastic Algorithms

Didier Devaurs, Kevin Molloy, Marc Vaisset, Amarda Shehu, Thierry Siméon, Juan Cortés

Citations: 26 • 2015

Finding transition state and minimum energy path of bistable elastic continua through energy landscape explorations

Guangchao Wan, Samuel J. Avis, Zizheng Wang, Xueju Wang, Halim Kusumaatmaja, Teng Zhang

Citations: 24 • 2023

Exhaustive Exploration of the Conformational Landscape of Small Cyclic Peptides Using a Robotics Approach

Maud Jusot, Dirk Stratmann, Marc Vaisset, Jacques Chomilier, Juan Cortés

Citations: 18 • 2018

Reconfiguration of multistable 3D ferromagnetic mesostructures guided by energy landscape surveys

Yi Li, Samuel J. Avis, Junbo Chen, Guangfu Wu, Teng Zhang, Halim Kusumaatmaja, Xueju Wang

Citations: 14 • 2021

Self-driving laboratories to autonomously navigate the protein fitness landscape

J. Rapp, Bennett J. Bremer, Philip A. Romero

Citations: 12 • 2023

Exploring the Landscape of Protein-Ligand Interaction Energy Using Probabilistic Approach

Marcin Pacholczyk, Marek Kimmel

Citations: 10 • 2010

Using robotics to fold proteins and dock ligands

Douglas L. Brutlag, Serkan Apaydin, Carlos Guestrin, David Hsu, Chris Varma, Amit Singh, Jean‐Claude Latombe

Citations: 9 • 2002